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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865074.1_cds_XP_016516209.1_28475
CDS Infomation

[gene=LOC107832829] [db_xref=GeneID:107832829] [protein=metacaspase-1-like] [protein_id=XP_016516209.1] [location=complement(join(44352..44411,44738..44944,45045..45165,45383..45713,47963..48353))] [gbkey=CDS]
Sequence

ATGATGCTTGTTAACTGTTCCAATTGCCACACACCTTTAGAATTGCCACCGGGAGCAAAG
TCCATACGTTGCGCAATCTGCCGAGCCGTCACTCTAATCGCCGATCCTCGCGCTGCCCCG
CCACCGCCACCACCACCACCAGCTTCCGCCTATAACAACCACTACTATCCTCGATCCCCT
GCCCCATCTCCTTATAATTATTACCACTCAACTACTAGTCAAACTCCCTCGCCGTCGTCA
CATGGCGGCCGCAAAAGAGCTGTGATTGTCGGAATTTCGTATAAGAATACCCGGAATGAA
CTGAAAGGCTGCATCAATGATGCTAAATGTATGAGGCACTTGCTGACTAATCGCTTCAAA
TTTCCTCAAGACTCCATTCTCATGCTTACTGAAGAAGAGAGGGATCCATACAGAATTCCA
ACTAAACATAATATAAGAATGGCAATGCACTGGCTTGTGCAAGGATGTCAAGCAGGGGAT
TCTCTGGTGTTTCATTATTCAGGTCATGGTTCACAACAAAGGAACTACACTGGAGATGAA
GTTGATGGGTTTGACGAAACACTTTGCCCTTTGGATTTTGAAACTCAGGGAATGATTGTT
GATGATGAAATTAATGCAACACTTGTTAGGCCTGTACCACGTGGAGCTAAGCTTCATGCT
ATTATAGATGCTTGTCACAGTGGTACCATGCTAGATCTACCGTTTCTTTGTAGGATGGAC
AGAACTGGACGATATGTATGGGAAGATCATCGTCCTCGATCAGGAGCATGGAAAGGAACA
AGTGGCGGAGAAGTTATATCCTTCAGTGGTTGTGATGATGATCAAAGCTCAGCTGATACG
GATAGTTTGTCCAAGGTCACTACAACTGGTGCAATGACCTTTTCCTTCATCCAAGCAATT
GAGCACGGACAAGGAACTACATATGGGGGCATTCTAAATGCAATGAGATCTTCCATTCGC
AGTTCTGATAATGGTATAGGGGGTGGCATTGTCACATCTCTTCTAACAATGCTGATTACT
GGAGGAAGTGTTGGTATTGGAATGAGACAGGAGCCACAGTTGACAGCCAATGAACTATTT
GATGTTTACACCAAGCCATTTTCATTATAG

Peptide Sequence

PEP ID

XP_016516209.1
PEP Infomation

PREDICTED: metacaspase-1-like [Nicotiana tabacum]
Sequence

MMLVNCSNCHTPLELPPGAKSIRCAICRAVTLIADPRAAPPPPPPPPASAYNNHYYPRSP
APSPYNYYHSTTSQTPSPSSHGGRKRAVIVGISYKNTRNELKGCINDAKCMRHLLTNRFK
FPQDSILMLTEEERDPYRIPTKHNIRMAMHWLVQGCQAGDSLVFHYSGHGSQQRNYTGDE
VDGFDETLCPLDFETQGMIVDDEINATLVRPVPRGAKLHAIIDACHSGTMLDLPFLCRMD
RTGRYVWEDHRPRSGAWKGTSGGEVISFSGCDDDQSSADTDSLSKVTTTGAMTFSFIQAI
EHGQGTTYGGILNAMRSSIRSSDNGIGGGIVTSLLTMLITGGSVGIGMRQEPQLTANELF
DVYTKPFSL

Transcript Sequence

Gene sequence data has not been registered.